In investigation some outputs are shorter than the numeration from the original PDB files, although numberAntibodySeq was given the full sequence in input. For example:
$ cat diffs/homo_sapiens/kabat/light/5t6l.diff
- 1 <
- 10 <
> S 108
> Q 109
The last two amino acids could have been numbered with sequential numbers, at least in investigation. However, since ANARCI works the same as numberAntibodySeq at the moment, numbering the whole sequence will make the programs more difficult to compare. Thus this issue is to be discussed more in-depth before implementing.
In investigation some outputs are shorter than the numeration from the original PDB files, although
numberAntibodySeqwas given the full sequence in input. For example:The last two amino acids could have been numbered with sequential numbers, at least in investigation. However, since ANARCI works the same as
numberAntibodySeqat the moment, numbering the whole sequence will make the programs more difficult to compare. Thus this issue is to be discussed more in-depth before implementing.