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fix(pl): derive n_var_per_sample orders deterministically
Python application using pip
#213:
Pull request
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fix/pl-deterministic-order-n-var-per-sample
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docs(agents): mandate deterministic pl ordering and ID-column labels
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style(tutorials): exempt the PUBLISHED_63 literal from black
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docs(tutorials): updated the accuracy of the reimplemented COPF algor…
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Merge pull request #35 from UKHD-NP/feat/faithful-bludau-2021-tutorial
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docs(tutorials): reproduce the published result in the Bludau 2021 tutorial
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#208:
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feat/faithful-bludau-2021-tutorial
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Merge pull request #34 from UKHD-NP/feat/summarize-peptides-by-neighb…
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feat(pp): add summarize_peptides_by_neighbourhood_union
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#206:
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feat/summarize-peptides-by-neighbourhood-union
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Merge pull request #33 from UKHD-NP/fix/williams-2018-missing-value-h…
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fix(datasets): preserve zeros and propagate NaN in williams_2018
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#204:
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fix(datasets): preserve zeros and propagate NaN in williams_2018
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#203:
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test/normalize_median
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#202:
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test/normalize_median
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refactor: include normalize_median in linting
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refactor: normalize_median
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refactor: normalize_median
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#198:
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dev/normalize_median
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feature/contaminants annotation and refactor/read_protein_ids and test/download/contaminants
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#196:
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feature/contaminants
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feature/contaminants annotation and refactor/read_protein_ids and test/download/contaminants
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tests/impute_downshift
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feature/contaminants annotation and refactor/read_protein_ids and test/download/contaminants
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#193:
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cicd: formalized legacy code linting approach
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cicd: added linting exception
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fix: legacy file CI now excluded
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dev/fix_pf_colors
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fix: proteoform colors are now deterministic via sort
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WIP
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