aegypticdmx is an R package (version 0.1.0) that provides data on the presence of Ae. aegypti in the Mexico City metropolitan area, along with machine learning algorithms to predict its presence. It was developed and is maintained by Felipe Antonio Dzul Manzanilla (ORCID: 0000-0002-2085-9141), and is released under the MIT license.
You can install the development version of aeaegypticdmx from GitHub with:
# install.packages("pak")
pak::pak("fdzul/aeaegypticdmx")-
ae_aegypti_cdmx is an sf object with 214 rows and 43 variables that contains records of the presence/pseudo-absence of Ae. aegypti in the urban area of the Mexico City metropolitan zone. Details of the variables can be found at zenodo or via the code ?aeaegypticdmx::ae_aegypti_cdmx or Reference.
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aoi. The study area. It is an sf object with the delimitation of the global urban area of Mexico City, obtained from the Facebook/Meta Global Urban Areas product (Data for Good).
This is a basic example which shows you how to solve a common problem:
library(aeaegypticdmx)
gtExtras::gt_plt_summary( aeaegypticdmx::ae_aegypti_cdmx|> sf::st_drop_geometry())In the Articles section, you will find the reproducible code for predicting the presence of Ae. aegypti in the Mexico City metropolitan area using LightGBM.