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PhytoOracle

Code for extracting phenotypic insights from plant phenomics data. Developed by Drs. Duke Pauli & Eric Lyons labs at the University of Arizona

19 followers
Tucson, AZ
phytooracle@gmail.com

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automation automation Public

Modular, Scalable Phenomic Data Processing Pipelines

Python 5 4
ezobde ezobde Public

EZOBDE | EaZy Object Detection

Python 2
pcd_ecc pcd_ecc Public

Extract Euler Characteristic Curves (ECC) from 3D point cloud data (PCD).

Python 2

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Showing 10 of 93 repositories

3d_entropy_features Public

phytooracle/3d_entropy_features's past year of commit activity

Python 0 0 1 0 Updated Jun 2, 2026
automation Public
Modular, Scalable Phenomic Data Processing Pipelines

phytooracle/automation's past year of commit activity

Python 5 MIT 4 2 1 Updated Jun 1, 2026
environmental_association Public
Environmental association for thermal and PS2 data from the gantry.

phytooracle/environmental_association's past year of commit activity

Jupyter Notebook 0 1 2 0 Updated May 13, 2026
rgb_flir_collect_gps Public
Collection of corner coordinates for RGB/FLIR geoTIFFs

phytooracle/rgb_flir_collect_gps's past year of commit activity

Python 1 0 0 2 Updated May 12, 2026
rgb_flir_stitch_plots Public
Stitching of geoTiff images (RGB/FLIR) into agricultural plots

phytooracle/rgb_flir_stitch_plots's past year of commit activity

Python 0 0 0 1 Updated May 12, 2026
rgb_flir_edit_gps Public
Edit corner coordinates of RGB/FLIR geoTIFFs

phytooracle/rgb_flir_edit_gps's past year of commit activity

Python 0 0 0 2 Updated May 12, 2026
MeteorologicalSensor_Postprocessing Public
Extracts per-date and per-season weather data from ClimaVue50 data after HDF5 extraction

phytooracle/MeteorologicalSensor_Postprocessing's past year of commit activity

Jupyter Notebook 0 0 0 0 Updated Jan 5, 2026
phytooracle_data Public

phytooracle/phytooracle_data's past year of commit activity

Python 0 0 2 0 Updated Oct 20, 2025
3d_landmark_selection Public
3D Module: GUI for point cloud landmark selection

phytooracle/3d_landmark_selection's past year of commit activity

Python 0 MIT 0 1 0 Updated Oct 6, 2025
3d_transformation_selection Public

phytooracle/3d_transformation_selection's past year of commit activity

Python 0 0 3 0 Updated Sep 10, 2025

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