A verification and grounding layer for AI-driven genome writing. Foundation models and a grounded co-scientist agent propose edits; PEN-STACK checks each against validated tools, never a language model: where a write is safe and durable, which enzyme makes it, and where it goes off-target. Calibrated, provenance-tracked, pre-registered.

PROpeg — precision-optimized pegRNA design and structure visualization tool for plant prime editing (ICAR-CRRI & ICAR-IASRI)

This repository contains the script written for PPR assembly automation with an OT2 system.

eGenesis is a biotechnology company working at the intersection of genome engineering and transplantation to make organ transplants accessible to all. Using a multiplex CRISPR gene-editing and genome-engineering platform, eGenesis engineers porcine (pig) donor organs that are immunologically and molecularly compatible with human recipients and…

Open-source DNA design, cloning, validation, and bioinformatics workbench with a modern web UI and real-world training.

This repo contains computational analysis performed in Li21.