Data analysis for the manuscript, "Site- and cell-type-specific miRNA and mRNA genes and networks across the cortex, striatum, and hypothalamus", Zacharias et al., Comm Biol, 2025
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Jun 5, 2025 - R
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neuroimmunology
Here are 8 public repositories matching this topic...
Data analysis for the manuscript, "Site- and cell-type-specific miRNA and mRNA genes and networks across the cortex, striatum, and hypothalamus", Zacharias et al., Comm Biol, 2025
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Jun 5, 2025 - R
T-cell receptor repertoire analysis figures for the manuscript: Intestinal macrophages modulate synucleinopathy along the gut–brain axis.
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Apr 24, 2026 - Python
gHH: Generalised Hodgkin–Huxley Model
computational-neuroscience drug-discovery electrophysiology dynamical-systems ordinary-differential-equations neuron mathematical-modelling astrocyte neuroimmunology in-silico hodgkin-huxley-model microglia ion-channels cardiac-electrophysiology hybrid-optimization-methods voltage-gated-ion-channels electrophysiological-modelling p2x-receptors enteric-glia hh-model
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Nov 12, 2025 - MATLAB
Thymus-derived myeloid education signatures (MES): single-cell + spatial transcriptomics pipeline mapping thymic immune programs to microglial tolerance positioning under glucocorticoid stress.
meta-analysis single-cell nmf single-cell-rna-seq neuroimmunology microglia spatial-transcriptomics scanpy anndata visium consensus-nmf glucocorticoid
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Jul 8, 2026 - Jupyter Notebook
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Apr 7, 2018 - Jupyter Notebook
An integrated computational pipeline for CRISPR-Cas13a (SHERLOCK) malaria diagnostics and trans-kingdom neuro-immune mapping, linking PfK13-driven pathogen detection to microglial homeostatic (CX3CR1/Iba1) set-points and Gut-Brain Axis (GBA) dysregulation.
bioinformatics reproducible-research rstats neuroimmunology plasmodium-falciparum molecular-diagnostics systems-immunology gut-brain-axis crispr-cas13a pfk13-genotyping microglia-activation
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Apr 5, 2026 - R
Modulo Bio is a San Diego, California biotechnology company reprogramming the neuroimmune system to overcome the world's toughest neurological diseases. The company develops therapeutics that target microglia, the brain's resident immune cells, by combining stem cell engineering, neurobiology, multiomics (CRISPR and single-cell techniques), and…
machine-learning company neuroscience healthcare drug-discovery biotechnology neuroimmunology apis-json therapeutics
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Aug 22, 2026
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